BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014G07LP1|AL426736
(740 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1561 1467 0.0
>3x_Contig1561
Length = 10959
Score = 1467 bits (740), Expect = 0.0
Identities = 740/740 (100%)
Strand = Plus / Minus
Query: 1 gatcccccaaaacagaacggaccaacagcttcaaagtcctgcaaagctatcaattatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3560 gatcccccaaaacagaacggaccaacagcttcaaagtcctgcaaagctatcaattatagt 3501
Query: 61 ttatagagggttattttctctctgcgagtgtgtttttttctgttttcttaggattatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3500 ttatagagggttattttctctctgcgagtgtgtttttttctgttttcttaggattatcta 3441
Query: 121 tcttcgttttactcgggcttgaatatttctttctagttcccttctttttttttggagttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3440 tcttcgttttactcgggcttgaatatttctttctagttcccttctttttttttggagttt 3381
Query: 181 tgcaataccgtgtgatacaaggttttcgaaagctttgtcatcagtgatatcatttacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3380 tgcaataccgtgtgatacaaggttttcgaaagctttgtcatcagtgatatcatttacttg 3321
Query: 241 tgctttcaccaaacattgtacgttttacaatttgacttatcctcaagtgaaatagcttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 tgctttcaccaaacattgtacgttttacaatttgacttatcctcaagtgaaatagcttct 3261
Query: 301 cccctccttttgaaatctctttttgtcattctgtcgatcttcccgttttattgctaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3260 cccctccttttgaaatctctttttgtcattctgtcgatcttcccgttttattgctaattt 3201
Query: 361 gaaattgggactttttattttctttgacgatatacattattggcttttagttaaattttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3200 gaaattgggactttttattttctttgacgatatacattattggcttttagttaaattttc 3141
Query: 421 ctttgaacggctcaatcacttatagtttttggcactgattgatagaactacgtcttgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3140 ctttgaacggctcaatcacttatagtttttggcactgattgatagaactacgtcttgaat 3081
Query: 481 ttattggcggaatcttagcggattatctcggaatcatagtaactatagaatctgtgacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3080 ttattggcggaatcttagcggattatctcggaatcatagtaactatagaatctgtgacct 3021
Query: 541 ggataccaaaatataatatttacaacaatatcagtactaaagggcaaaattaacctaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3020 ggataccaaaatataatatttacaacaatatcagtactaaagggcaaaattaacctaaag 2961
Query: 601 ttattatgccagaacaagaaagatttgttcagactaccggtggtaagggtactccgaagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2960 ttattatgccagaacaagaaagatttgttcagactaccggtggtaagggtactccgaagc 2901
Query: 661 aaattcacattgctcataggaaatctccttctgaacttacgaatttaatgattgagcagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2900 aaattcacattgctcataggaaatctccttctgaacttacgaatttaatgattgagcagt 2841
Query: 721 ttactctacaaaaacagatc 740
||||||||||||||||||||
Sbjct: 2840 ttactctacaaaaacagatc 2821
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7505
Number of Sequences: 1807
Number of extensions: 7505
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 740
length of database: 10,358,551
effective HSP length: 16
effective length of query: 724
effective length of database: 10,329,639
effective search space: 7478658636
effective search space used: 7478658636
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)